2024

• Moriyama H, Kotta-Loizou I, and Kim KH. 2024. Editorial: Community Series in Mycoviruses and Related Viruses Infectng Fungi, Lower Eukaryotes, Plants and Insects, Volume II. Front Microbiol. 15:1349526. doi: 10.3389/fmicb.2024.1349526.

• Choi H, Jang S, Jung M, Kwon SJ, Kim HK, Kang HG, Lee D, Kim KH*. 2024. Investigating antiviral activities of iodine-conjugated organic agents against major viruses infecting pepper in Korea. Chem. Biol. Technol. Agric. 11:30 doi: 10.1186/s40538-024-00554-4.


2023

• Widyasari K, Bwalya J, Kim K-H*. 2023. Binding immunoglobulin 2 functions as a proviral factor for potyvirus infections in Nicotiana benthamiana. Mol. Plant Pathol. 24, 179-187. DOI: 10.1111/mpp.13284.

• Bwalya J, Kim K-H*. 2023. The crucial role of chloroplast-related proteins in viral genome replication and host defense against positive-sense single-stranded RNA viruses. Plant Pathology J. 39, 28-38. doi: 10.5423/PPJ.RW.10.2022.0139.

• Kwon G, Yu J*, Kim KH*. 2023. Identifying transcription factors associated with Fusarium graminearum virus 2 accumulation in Fusarium graminearum by phenome-based investigation. Virus Res. 326: 199061. doi: 10.1016/j.virusres.2023.199061.

• Alazem M, Bwalya J, Hsuan P, Yu J, Chu HC, Burch-Smith T, Kim KH*. 2023. Viral synergism suppresses R gene-mediated resistance by impairing downstream defense mechanisms in soybean. Plant Physiology 192, 3088-3105. doi: 10.1093/plphys/kiad255.

• Bwalya J, Widyasari K, Völz R, Kim KH*. 2023. Chloroplast-related host proteins interact with NIb and NIa-Pro of soybeans mosaic virus and induce resistance in the susceptible cultivar. Virus Res. doi: 10.1016/j.virusres.2023.199205.

• Bwalya J, Widyasari K, Völz R, Kim KH*. 2023. Chloroplast-related host proteins interact with NIb and NIa-Pro of soybeans mosaic virus and induce resistance in the susceptible cultivar. Virus Res. 336, 199205. doi: 10.1016/j.virusres.2023.199205.


2022

• Widyasari K, Tran PT, Shin J, Son H, Kim K-H*. 2022. Enhanced resistance to soybean mosaic virus by overexpressing GmPAP2.1 from cultivar L29 in the susceptible cultivar. J. Exp. Bot. 73, 1623–1642. DOI: 10.1093/jxb/erab496.

• Bwalya J, Alazem M, Kim K-H*. 2022. Photosynthesis-related genes induce resistance against soybean mosaic virus: evidence for involvement of the RNA silencing pathway. Mol. Plant Pathol. 23, 543–560. DOI: 10.1111/mpp.13177.

• Oh J, Yu J, Jang S, Kim K-H*. 2022. Identification of a new strain of Ligustrum virus A causing leaf necrosis and chlorosis symptoms in Syringa oblata var. delatata (Nakai) Rehder. Arch. Virol. 167, 1487–1490. DOI: 10.1007/s00705-022-05439-1.

• Fang M, Yu J, Kwak H-R, Kim K-H*. 2022. Identification of viral genes involved in pepper mottle virus replication and symptom development in Nicotiana benthamiana. Front. Plant Sci. 13, 1048074. doi: 10.3389/fpls.2022.1048074.

• 김국형, 김경수, 김기태, 박숙영, 손호경, 오상근, 정희영, 최영준, 최인영. 2022. 식물병리학 및 식물병원체 제4판. 라이프사이언스. P. 446. ISBN 978-89-6154-415-3.

• Kweon Y, Fang M, Shin S-Y, Lee D, Kim K-H*, Shin C*. 2022. Sequence optimization and multiple gene-targeting improve the inhibitory efficacy of exogenous double-stranded RNA against pepper mottle virus in Nicotiana benthamiana. Appl. Biol. Chem. 65, 87. doi: 10.1186/s13765-022-00756-0.


2021

• Yoon J, Fang M, Lee D, Park M, Kim K-H*, Shin C*. 2021. Double-stranded RNA confers resistance to pepper mottle virus in Nicotiana benthamiana. Appl. Biol. Chem. 64, 1.

• Yu J, Kim K-H. 2021. A phenom-wide association study of the effets of Fusarium graminearum transcription factors on Fusarium graminearum virus 1 infection. Front Microbiol. 12, 622261.

• Jo Y, Back CG, Kim K-H, Chu H, Lee JH, Moh SH, Cho WK. 2021. Comparative study of metagenomics and metatranscriptomics to reveal microbiomes in overwintering pepper fruits. Int. J. Mol. Sci. 22, 6202.

• Jo Y, Back CG, Kim K-H, Chu H, Lee JH, Moh SH, Cho WK. 2021. Using RNA-sequencing data to examine tissue-specific garlic microbiomes. Int. J. Mol. Sci. 22, 6791.

• Jo Y, Kim K-H, Cho WK. 2021. First report of bean common mosaic virus infecting common bean (Phaseolus vulgaris L.) in Korea. J. Plant Pathol. 103, 1061-1062.

• Jo Y, Kim K-H, Cho WK. 2021. First report of cucumber mosaic virus infecting garlic (Allium sativum L.) in Korea. J. Plant Pathol. 103, 1063-1064.

• Fang M, Kim K-H*. 2021. Pepper mottle virus and its host interactions: current state of knowledge. Viruses 13, 1930.


2020
 

• Yu J, Park JY, Heo JI, Kim K-H*. 2020. Fusarium graminearum virus 1 ORF2 protein is required for suppression of RNAi by transcriptional repression of FgDICER-2 and FgAGO-1. Mol. Plant Pathol. 21, 230-243.

• Widyasari K, Alazem M, Kim K-H*. 2020. Soybean resistance to soybean mosaic virus. Plants 9, 219.

• Yu J, Kim K-H*. 2020. Exploration of the interactions between mycoviruses and Fusarium graminearum. Adv. Virus Res. 106, 123-144.

• Choi H, Jo Y, Cho WK, Yu J, Tran PT, Salaipeth L, Kwak HR, Choi HS, Kim K-H*. 2020. Detection of viruses and viroids infecting tomato and pepper plants in Vietnam by metatranscriptomics. Int. J. Mol. Sci. 21, 7565.

• Heo JI, Yu J, Choi H, Kim K-H*. 2020. The signatures of natural selection and molecular evolution in Fusarium graminearum virus 1. Front Microbiol. 11, 600775.


2019
 

• Alazem M, Kim K-H*, Lin NS. 2019. Effects of abscisic acid and salicylic acid on gene expression in the antiviral RNA silencing pathway in Arabidopsis. Int. J. Mol. Sci. 20, 2538.

• Alazem M, Widyasari K, Kim K-H*. 2019. An avirulent strain of soybean mosaic virus reverses the defensive effect of abscisic acid in a susceptible soybean cultivar. Viruses 11, 879.

• Tran PT, Fang M, Widyasari K, Kim K-H*. 2019. A plant intron enhances the performance of an infectious clone in planta. J. Virol. Methods 265, 26-34.

• Bae M, Jo Y, Choi H, Tran PT, Kim K-H*. 2019. First report of tomato mosaic virus isolated from tomato and pepper in Vietnam. J. Plant Pathol. 101, 181.

• Choi H, Jo Y, Tran PT, Kim K-H*. 2019. First report of ageratum yellow vein virus infecting tomato in Vietnam. J. Plant Pathol. 101, 1267.

2018
 

• Phu-Tri Tran, Kristin Widyasari, and Kook-Hyung Kim*. 2018. Isolation and validation of a candidate Rsv3 gene from a soybean genotype that confers strain-specific resistance to soybean mosaic virus. Virology 513, 153-159.

• Jisuk Yu, Kyung-mi Lee, Won Kyoung Cho, and Kook-Hyung Kim*. 2018. Differential Contribution of RNA Interference Components in Response to Distinct Fusarium graminearum Virus Infections. J. Virol. 92:e01756-17.

• Yeonhwa Jo, Myung-Kyu Song, Hoseong Choi, Kristin Widyasari, Jae-Seong Park, Jae-Wung Lee, Kook-Hyung Kim and Won Kyong Cho. 2018. In silico identification of viruses and viroids infecting grapevine cultivar Cabernet Sauvignon using a grapevine transcriptome. J. Plant Pathol. 100, 91-96.

• Suzuki N, Ghabrial SA, Kim KH, Pearson M, Marzano SL, Yaegashi H, Xie J, Guo L, Kondo H, Koloniuk I, Hillman BI, Ictv Report Consortium. 2018. ICTV Virus Taxonomy Profile: Hypoviridae. doi: J. Gen. Virol. 10.1099/jgv.0.001055.

• Alazem M, Tseng KC, Chang WC, Seo JK, Kim K-H*. 2018. Elements Involved in the Rsv3-Mediated Extreme Resistance against an Avirulent Strain of Soybean Mosaic Virus. Viruses 10 (11).

• Jang-Kyun Seo, Sun-Jung Kwon and Kook-Hyung Kim*. 2018. Replication and the replicase. In: Cucumber mosaic virus, eds. by P. Palukaitis and F. Garcia-Arenal. APS Press. 340 p. ISBN: 978-0-89054-609-3

2017
 

• Phu-Tri Tran, Kristin Widyasari, Jee-Yoon Park, and Kook-Hyung Kim. Engineering an auto-activated R protein that is in vivo activated by a viral protease. Virology 510: 242-247

• Hangil Kim, Won Kyong Cho, Sen Lian, and Kook-Hyung Kim. Identification of residues or motif(s) of the rice stripe virus NS3 protein required for self-interaction and for silencing suppressor activity. Virus Res. 235: 14-23

• Yeonhwa Jo, Hoseong Choi, Miah Bae, Sang-Min Kim, Sun-Lim Kim, Bong Choon Lee, Won Kyong Cho1 and Kook-Hyung Kim. De novo genome assembly and single nucleotide variations for soybean mosaic virus using soybean seed transcriptome data. Plant Pathol J. 33(5): 478–487.

2016
 

• Sen Lian, Won Kyong Cho, Sang-Min Kim, and Kook-Hyung Kim. Time-course small RNA profiling reveals rice miRNAs and their target genes in response to Rice stripe virus infection. PLoS One 11(9): e0162319

• Sang-Ho Park, Hoseong Choi, Semin Kim, Won Kyong Cho, and Kook-Hyung Kim. Development of virus-induced gene expression and silencing vector derived from grapevine Algerian latent virus. Plant Pathol J. 32(4): 371-376.

• Moonil Son, Yoonseung Lee, and Kook-Hyung Kim. The transcription cofactor Swi6 of the Fusarium graminearum is involved in Fusarium graminearum virus 1 induced phenotype alteration. Plant Pathol J. 32(4): 281-289.

• Hoseong Choi, Won Kyong Cho, and Kook-Hyung Kim . Two homologous host proteins interact with potato virus X RNAs and CPs and affect viral replication and movement. Sci. Rep. 6: 28743.

• Phu-Tri Tran, Hoseong Choi, Doil Choi, and Kook-Hyung Kim. Virus-induced gene silencing reveals signal transduction components required for the Pvr9-mediated hypersensitive response in Nicotiana benthamiana. Virology. 495: 167-172

• Jang-Kyun Seo, Hong-Soo Choi, and Kook-Hyung Kim. Engineering of soybean mosaic virus as a versatile tool for studying protein-protein interactions in soybean. Sci. Rep. 6: 22436.

• Moonil Son, Hoseong Choi, and Kook-Hyung Kim. Specific binding of Fusarium graminearum Hex1 protein to untranslated regions of the genomic RNA of Fusarium graminearum virus 1 correlates with increased accumulation of both strands of viral RNA. Virology. 489: 202-211.

• Minji Kang, Jang-Kyun Seo, Hoseong Choi, Hong-Soo Choi, and Kook-Hyung Kim. Establishment of a simple and rapid gene delivery system for cucurbits by using engineered zucchini yellow mosaic virus. Plant Pathol J. 32(1): 70-76

2015
 

• Moonil Son, Jisuk Yu, Kook-Hyung Kim. Five questions about mycoviruses. PLoS Pathogens. 11(11): e1005172.

• Minji Kang, Jang-Kyun Seo, Dami Song, Hong-Soo Choi, and Kook-Hyung Kim. Establishment of an Agrobacterium-mediated inoculation system for cucumber green mottle mosaic virus. Plant Pathol. J. 31(4): 433-437.

• Won Kyong Cho, Sen Lian, Sang-Min Kim, Bo Yooon Seo, Jin Kyo Jung, and Kook-Hyung Kim. Time-course RNA-Seq analysis reveals transcriptional changes in rice plants triggered by Rice stripe virus infection. PLoS One 10(8): e0136736.

• Jisuk Yu, Kyung-Mi Lee, Moonil Son and Kook-Hyung Kim. Effects of the deletion and overexpression of Fusarium graminearum gene FgHal2 on host response to mycovirus Fusarium graminearum virus 1. Mol. Plant Pathol. 16(7): 641-652

• Hoseong Choi, Yeonhwa Jo, Sen Lian, Kyoung-Min Jo, Hyosub Chu, Ju-Yeon Yoon, Seung-Kook Choi, Kook-Hyung Kim, and Won Kyong Cho. Comparative analysis of chrysanthemum transcriptome in response to three RNA viruses: Cucumber mosaic virus,Tomato spotted wilt virus and Potato virus X.. Plant Mol. Biol. 88(3): 233-248.

• Phu-Tri Tran, Hoseong Choi, Doil Choi and Kook-Hyung Kim. Molecular characterization of Pvr9 that confers a hypersensitive response to Pepper mottle virus (a potyvirus) in Nicotiana benthamiana. Virology. 481: 113-123

2014
 

• Yeonhwa Jo, Kyoung-Min Jo, Sang-Ho Park, Kook-Hyung Kim, and Won Kyong Cho. 2014. Transcriptomic landscape of chrysanthemums infected by Chrysanthemum stunt viroid. Plant Omics. 7: 1-11

• Won Kyong Cho, Yeonhwa Jo, Hyosub Chu, Sang-Ho Park, and Kook-Hyung Kim. 2014. Integration of latex protein sequence data provides comprehensive functional overview of latex proteins. Mol. Biol. Rep. 41: 1469-1481.

• Sen Lian, Won Kyong Cho, Yeonhwa Jo, Sang-Min Kim, and Kook-Hyung Kim. 2014. Interaction study of rice stripe virus proteins reveals a region of the nucleocapsid protein (NP) required for NP self-interaction and nuclear localization. Virus Res. 183: 6-14.

• Mi-Ri Park, Rae-Dong Jeong, and Kook-Hyung Kim. 2014. Understanding the intracellular trafficking and intercellular transport of potexviruses in their host plants. Front. Plant Sci. 5: 60.

• Phu-Tri Tran, Hoseong Choi, Saet-Byul Kim, Hyun-Ah Lee, Doil Choi, and Kook-Hyung Kim. 2014. A simple method for screening of plant NBS-LRR genes that confer a hypersensitive response to plant viruses and its application for screening candidate pepper. J. Virol Methods. 201: 57-64.

• Mi Sa Vo Phan, Jang-Kyun Seo, Hong-Soo Choi, Su-Heon Lee, and Kook-Hyung Kim. 2014. Molecular and biological characterization of an isolate of Cucumber mosaic virus from Glycine soja by generating its infectious full-genome cDNA clones. Plant Pathol. J. 30: 159-167.

• Kyung-Mi Lee, Won Kyong Cho, Jisuk Yu, Moonil Son, Hoseong Choi, Kyunghun Min, Yin-Won Lee and Kook-Hyung Kim. 2014. A comparison of transcriptional patterns and mycological phenotypes following infection of Fusarium graminearum by four mycoviruses. PLoS One 9: e100989.

• Jang-Kyun Seo, Sun-Jung Kwon, Won Kyong Cho, Hong-Soo Choi, and Kook-Hyung Kim. 2014. Type 2C protein phosphatase is a key regulator of antiviral extreme resistance limiting virus spread. Sci. Rep. 4: 5905.

• Mi Sa Vo Phan, Jang-Kyun Seo, Hong-Soo Choi, Su-Heon Lee, and Kook-Hyung Kim. 2014. Pseudorecombination between two distinct strains of cucumber mosaic virus results in enhancement of symptom severity. Plant Pathol. J. 30: 316-322.

2013
 

• Hoseong Choi, Won Kyong Cho, Jisuk Yu, Jong-Seung Lee and Kook-Hyung Kim. 2013. Highly specific detection of five exotic quarantine plant viruses using RT-PCR. Plant Pathol J. 29: 99-104.

• Won Kyong Cho, Kyung-Mi Lee, Jisuk Yu, Moonil Son and Kook-Hyung Kim. 2013. Insight into mycoviruses infecting Fusarium species. Adv. Virus Res. 86: 273-288.

• Won Kyong Cho, Yeonhwa Jo, Kyoung-Min Jo, and Kook-Hyung Kim. 2013. A current overview of two viroids infecting chrysanthemums: Chrysanthemum stunt viroid and Chrysanthemum chlorotic mottle viroid. Viruses 5: 1099-1113.

• Mi-Ri Park and Kook-Hyung Kim. 2013. Molecular characterization of the interaction between the N-terminal region of Potato virus X (PVX) coat protein (CP) and Nicotiana benthamiana PVX CP-interacting protein, NbPCIP1. Virus Genes 46: 517-523.

• Mi-Ri Park, Jang-Kyun Seo and Kook-Hyung Kim. 2013. Viral and nonviral elements in potexvirus replication and movement and in antiviral responses. Adv. Virus Res. 87: 73-110.

• Sen Lian, Jong-Seung Lee, Won Kyong Cho, Jisuk Yu, Mi-Kyeong Kim, Hong-Soo Choi and Kook-Hyung Kim. 2013. Phylogenetic and recombination analysis of Tomato spotted wilt virus. PLoS ONE 8: e63380.

• Dami Song, Won Kyong Cho, Sang-Ho Park, Yeonhwa Jo, and Kook-Hyung Kim. 2013. Evolution of and horizontal gene transfer in the Endornavirus. PLoS ONE 8: e64270.

• Jang-Kyun Seo, Mi Sa Vo Phan, Sung-Hwan Kang, Hong-Soo Choi and Kook-Hyung Kim. 2013. The charged residues in the surface-exposed C-terminus of the Soybean mosaic virus coat protein are critical for cell-to-cell movement. Virology 446: 95-101.

• Sang-Ho Park, Tim L. Sit, Kook-Hyung Kim and Steven A. Lommel. 2013. The red clover necrotic mosaic virus capsid protein N-terminal amino acids possess specific RNA binding activity and are required for stable virion assembly. Virus Res. 176: 107-118.

• Moonil Son, Kyung-Mi Lee, Jisuk Yu, Minji Kang, Jin Man Park, Sun-Jung Kwon and Kook-Hyung Kim. 2013. The HEX1 Gene of Fusarium graminearum Is Required for Fungal Asexual Reproduction and Pathogenesis and for Efficient Viral RNA Accumulation of Fusarium graminearum Virus 1. J. Virol. 87: 10356-10367.

• Won Kyong Cho, Sen Lian, Sang-Min Kim, Sang-Ho Park and Kook-Hyung Kim. 2013. Current insights into research on Rice stripe virus. Plant Pathol. J. 29: 223-233.

2012
 

• Sang-Yun Cho, Won Kyong Cho, Seong-Han Sohn and Kook-Hyung Kim. 2012. Interaction of the host protein NbDnaJ with potato virus X minus-strand stem-loop 1 RNA and capsid protein affects viral replication and movement. Biochem. Biophys. Res. Commun. 417: 451-456.

• Sang-Yun Cho and Kook-Hyung Kim. 2012. Identification of the capsid protein-binding region of the SL1(+) RNA located at the 5′ region of the potato virus X genome. Plant Pathol. J. 28: 75-80.

   • Sang-Ho Park and Kook-Hyung Kim. 2012. Virus-induced silencing of WRKY1 transcription factor that interact with the SL1 structure of the potato virus X leads to higher viral RNA accumulation and severe necrotic symptom. Plant Pathol. J. 28: 40-48.

  • Semin Kim, Won Kyong Cho, Hyeok-Geun Lee, Sang-Ho Park, Seong-Han Sohn, and Kook-Hyung Kim. 2012. The p19 protein of grapevine algerian latent virus is a determinant of systemic infection of Chenopodium quinoa. Virus Res. 165: 81-89.

   • Sang-Yun Cho, Won Kyong Cho and Kook-Hyung Kim. 2012. Identification of tobacco proteins associated with the stem-loop 1 RNAs of potato virus X. Mol. Cells 33: 379-384.

  • Won Kyong Cho, Jisuk Yu, Kyung-Mi Lee, Moonil Son, Kyunghun Min, Yin-Won Lee and Kook-Hyung Kim. 2012. Genome-wide expression profiling shows transcriptional reprogramming in Fusarium graminearum by Fusarium graminearum virus 1-DK21 infection. BMC Genomics 13: 173.

   • Sang-Yun Cho, Won Kyong Cho, Hong-Soo Choi and Kook-Hyung Kim. 2012. Cis-acting element (SL1) of potato virus X controls viral movement by interacting with the NbMPB2Cb and viral proteins. Virology 427: 166-176.

  • Sang-Ho Park, Tim L. Sit, Steven A. Lommel and Kook-Hyung Kim. 2012. The red clover necrotic mosaic virus capsid protein N-terminal lysine-rich motif is a determinant of symptomatology and virion accumulation. Mol. Plant Pathol. 13: 744-754.

2011
 

• Jang-Kyun Seo, Seong-Han Sohn and Kook-Hyung Kim. 2011. A single amino acid change in HC-Pro of soybean mosaic virus alters symptom expression in a soybean cultivar carrying Rsv1 and Rsv3. Arch. Virol. 156: 135-141.

• Sen Lian, Miranda Gilda Jonson, Won Kyong Cho, Hong-Soo Choi, Yeon-Ho Je and Kook-Hyung Kim. 2011. Generation of antibodies to rice stripe virus proteins based on recombinant proteins and synthetic polypeptides. Plant Pathol. J. 27: 37-43.

• Jong-Seung Lee, Won Kyong Cho, Su-Heon Lee, Hong-Soo Choi and Kook-Hyung Kim. 2011. Development of RT-PCR based method for detecting five non-reported quarantine plant viruses infecting the family Cucurbitaceae or Solanaceae. Plant Pathol. J. 27: 93-97.

• Jong-Seung Lee, Won Kyong Cho, Mi-Kyeong Kim, Hae-Ryun Kwak, Hong-Soo Choi and Kook-Hyung Kim. 2011. Complete genome sequences of three tomato spotted wilt virus isolates from tomato and pepper plants in Korea and their phylogenetic relationship with other TSWV isolates. Arch. Virol. 156: 725-728.

• Miranda Gilda Jonson, Sen Lian, Hong-Soo Choi, Gwan-Seok Lee, Chang-Suk Kim and Kook-Hyung Kim. 2011. Genetic reassortment of Rice stripe virus RNA segments detected by RT-PCR restriction analysis-based method. Plant Pathol. J. 27: 148-155.

• Kyung-Mi Lee, Jisuk Yu, Moonil Son, Yin-Won Lee and Kook-Hyung Kim. 2011. Transmission of Fusarium boothii mycovirus via protoplast fusion causes hypovirulence in other phytopathogenic fungi. PLoS ONE 6(6): e21629.

• Jisuk Yu, Kyung-Mi Lee, Moonil Son, Kook-Hyung Kim. 2011. Molecular characterization of Fusarium graminearum virus 2 isolated from Fusarium graminearum strain 98-8-60. Plant Pathol. J. 27: 285-290.

• Jong-Seung Lee, Won Kyong Cho, Hong-Soo Choi and Kook-Hyung Kim. 2011. RT-PCR detection of five quarantine plant RNA viruses belonging to poty- and bunyaviruses. Plant Pathol. J. 27: 291-296.